* tests/: Rename as...
* tests/core/: ... this.
* python/tests/: Rename as...
* tests/python/: ... this.
* python/tests/run.in: Move as...
* tests/run.in: This, and adjust.
* tests/Makefile.am: Adjust to run both core and python tests.
* configure.ac, README, debian/python3-spot.examples, debian/rules,
doc/org/tut.org, python/Makefile.am, spot/ltsmin/Makefile.am,
spot/ltsmin/kripke.test, spot/sanity/ipynb.test: Adjust.

* spot/bin/: Move...
* bin/: ... here.
* spot/tests/: Move...
* tests/: ... here.
* Makefile.am, README, bench/stutter/Makefile.am,
bench/stutter/stutter_invariance_formulas.cc, doc/Makefile.am,
configure.ac, debian/rules, spot/Makefile.am, spot/ltsmin/Makefile.am,
spot/ltsmin/kripke.test, spot/sanity/style.test, python/tests/run.in:
Adjust.

* NEWS: Mention the change.
* src/: Rename as ...
* spot/: ... this, adjust all headers to include <spot/...> instead of
"...", and adjust all Makefile.am to search headers from the top-level
directory.
* HACKING: Add conventions about #include.
* spot/sanity/style.test: Add a few more grep to catch cases
that do not follow these conventions.
* .gitignore, Makefile.am, README, bench/stutter/Makefile.am,
bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, configure.ac,
debian/rules, doc/Doxyfile.in, doc/Makefile.am,
doc/org/.dir-locals.el.in, doc/org/g++wrap.in, doc/org/init.el.in,
doc/org/tut01.org, doc/org/tut02.org, doc/org/tut03.org,
doc/org/tut10.org, doc/org/tut20.org, doc/org/tut21.org,
doc/org/tut22.org, doc/org/tut30.org, iface/ltsmin/Makefile.am,
iface/ltsmin/kripke.test, iface/ltsmin/ltsmin.cc,
iface/ltsmin/ltsmin.hh, iface/ltsmin/modelcheck.cc,
wrap/python/Makefile.am, wrap/python/ajax/spotcgi.in,
wrap/python/spot_impl.i, wrap/python/tests/ltl2tgba.py,
wrap/python/tests/randgen.py, wrap/python/tests/run.in: Adjust.

Fixes #114.

* src/parseaut/public.hh: Add support for a trust_hoa option.
* src/parseaut/parseaut.yy: If trust_hoa is set, recognize the
"inherently-weak" and "stutter-invariant" properties.
* src/bin/common_conv.cc, src/bin/common_conv.hh (read_automaton):
Move...
* src/bin/common_hoaread.cc, src/bin/common_hoaread.hh: ... in this
new file, that also handle the --trust-hoa option.
* src/bin/Makefile.am: Add them.
* src/bin/autfilt.cc, src/bin/dstar2tgba.cc, src/bin/ltlcross.cc,
src/bin/ltldo.cc: Use them.
* src/tests/parseaut.test, src/tests/ltldo.test: Adjust, and test
--trust-hoa=no.
* src/tests/complement.test, src/tests/prodor.test,
src/tests/sbacc.test: Adjust.
* wrap/python/spot.py (automata): Add option trust_hoa.
* NEWS: Update.

* src/twaalgos/sccfilter.hh,
src/twaalgos/sccfilter.cc (scc_filter_states): Remove useless acceptance
marks while preserving state-based acceptance.  Add a new argument
to specify if all useless mark have to be removed, like for scc_filter.
* src/twaalgos/simulation.cc: Use the new parameter.
* src/twaalgos/postproc.cc: Likewise.  Also call do_scc_filter even
after WDBA simplification to cleanup trivial SCCs.  Preserve state-based
acceptance for weak automata.
* src/tests/readsave.test: Add one test.
* src/tests/dstar.test, src/tests/prodor.test, src/tests/remfin.test,
src/tests/sim3.test, wrap/python/tests/automata.ipynb,
wrap/python/tests/piperead.ipynb: Adjust expected output.
* NEWS: Mention the change.

* src/twaalgos/product.cc, src/twaalgos/product.hh: Implement
the variance.
* src/bin/autfilt.cc: Expose it.
* src/tests/prodor.test: New file.
* src/tests/Makefile.am: Add it.
* NEWS: Mention it.