GitLab

* bench/dtgbasat/gen.py, spot/twaalgos/complement.hh: Fix
looser->loser and lossing->losing.
* tests/sanity/style.test: Catch 'an uni[^n]'.
* spot/ta/ta.hh, spot/taalgos/tgba2ta.cc, spot/taalgos/tgba2ta.hh,
spot/twa/twagraph.cc, spot/twaalgos/complement.hh,
spot/twaalgos/sccinfo.cc, spot/twaalgos/sum.hh: Fix various occurences
of this pattern.

The algorithm had two problems: it was removing only useless
destination from universal destination (instead of removing the entire
edge), and it was not properly iterating over the entire reachable
automaton.

* spot/twa/twagraph.cc: Fix it.
* spot/twa/twagraph.hh: Adjust documentation.
* tests/core/alternating.test: Add more tests.
* tests/python/twagraph.py: Adjust.
* NEWS: Mention the bug.

For #212.

* spot/twa/twa.hh: Rename prop_deterministic() as prop_universal(),
and keep the old name as deprecated.
* spot/twaalgos/isdet.cc, spot/twaalgos/isdet.hh: Rename
is_deterministic() as is_universal(), and add a new function
for is_deterministic().
* doc/org/concepts.org, doc/org/hoa.org, doc/org/tut21.org,
spot/tl/hierarchy.cc, spot/twa/twagraph.cc,
spot/twaalgos/are_isomorphic.cc, spot/twaalgos/determinize.cc,
spot/twaalgos/dtbasat.cc, spot/twaalgos/dtwasat.cc,
spot/twaalgos/hoa.cc, spot/twaalgos/minimize.cc,
spot/twaalgos/postproc.cc, spot/twaalgos/product.cc,
spot/twaalgos/randomgraph.cc, spot/twaalgos/remfin.cc,
spot/twaalgos/simulation.cc, spot/twaalgos/totgba.cc,
spot/twaalgos/word.cc, tests/python/product.ipynb,
tests/python/remfin.py: Adjust.
* NEWS: Mention the change.

* spot/twa/twa.hh: Add support.  Make two constructors for prop_set in
order to diagnose constructions with 5 arguments.
* spot/parseaut/parseaut.yy: Adjust diagnostics for complete and
deterministic.
* spot/tl/exclusive.cc, spot/twa/twagraph.cc,
spot/twaalgos/alternation.cc, spot/twaalgos/complete.cc,
spot/twaalgos/complete.hh, spot/twaalgos/degen.cc,
spot/twaalgos/determinize.cc, spot/twaalgos/hoa.cc,
spot/twaalgos/isdet.cc, spot/twaalgos/mask.cc,
spot/twaalgos/minimize.cc, spot/twaalgos/product.cc,
spot/twaalgos/remfin.cc, spot/twaalgos/remprop.cc,
spot/twaalgos/sbacc.cc, spot/twaalgos/sccfilter.cc,
spot/twaalgos/simulation.cc, spot/twaalgos/strength.cc,
spot/twaalgos/stutter.cc, spot/twaalgos/totgba.cc,
tests/core/parseaut.test, tests/python/product.ipynb: Adjust.
* NEWS, doc/org/concepts.org, doc/org/hoa.org,
doc/org/tut21.org: Document it.

Part of #212.

* spot/misc/common.hh (SPOT_DEPRECATED): Improve support current
compilers and options flags.
* spot/twa/twagraph.hh, spot/graph/graph.hh (is_alternating): Mark it
as deprecated.
(is_existential): New method.
* bin/autfilt.cc, bin/ltlcross.cc, spot/parseaut/parseaut.yy,
spot/twa/twa.cc, spot/twa/twagraph.cc, spot/twaalgos/alternation.cc,
spot/twaalgos/are_isomorphic.cc, spot/twaalgos/canonicalize.cc,
spot/twaalgos/couvreurnew.cc, spot/twaalgos/cycles.cc,
spot/twaalgos/degen.cc, spot/twaalgos/determinize.cc,
spot/twaalgos/dot.cc, spot/twaalgos/dtbasat.cc,
spot/twaalgos/dtwasat.cc, spot/twaalgos/hoa.cc,
spot/twaalgos/isunamb.cc, spot/twaalgos/isweakscc.cc,
spot/twaalgos/mask.hh, spot/twaalgos/minimize.cc,
spot/twaalgos/postproc.cc, spot/twaalgos/product.cc,
spot/twaalgos/randomize.cc, spot/twaalgos/remfin.cc,
spot/twaalgos/sbacc.cc, spot/twaalgos/sccfilter.cc,
spot/twaalgos/sccinfo.cc, spot/twaalgos/simulation.cc,
spot/twaalgos/strength.cc, tests/core/graph.cc, tests/core/ngraph.cc,
tests/python/alternating.py: Adjust all uses.
* NEWS: Mention the renaming.

* tests/core/alternating.test: Run some of the test through
valgrind to exhibit the bug.
* spot/twa/twagraph.cc: Fix it.

* spot/graph/graph.hh (internal::univ_dest_mapper): New helper class.
* spot/twa/twagraph.cc (merge_univ_dests): Simplify using
univ_dest_mapper.
(purge_unreachable_states, purge_dead_states): Add support for
alternation.
* tests/core/alternating.test: More tests.

and call it after parsing

* spot/twa/twagraph.cc, spot/twa/twagraph.hh
(twa_graph::merge_univ_dests): New method.
* spot/parseaut/parseaut.yy: Call it.
* spot/twaalgos/dot.cc: Improve output, now that
several edges can use the same universal destination.
* tests/core/alternating.test, tests/core/complete.test,
tests/core/parseaut.test, tests/python/_altscc.ipynb,
tests/python/alternating.py, tests/python/alternation.ipynb: Adjust
test case.
* doc/org/tut24.org: Adjust example.

* NEWS, spot/twa/twa.hh: Document the change.
* spot/twa/twagraph.hh, spot/kripke/kripkegraph.hh:
  Add an exception in get_init_state_number().
  get_init_state() now calls get_init_state_number().
* spot/twa/twagraph.cc, spot/twaalgos/simulation.cc,
  spot/twaalgos/powerset.cc, spot/twaalgos/complete.cc,
  spot/twaalgos/sccfilter.cc: Remove now useless tests.
* spot/twaalgos/hoa.cc: Remove now useless comment.
* spot/twaalgos/minimize.cc: Never return an automaton with no state.

* spot/graph/ngraph.hh, spot/ltsmin/ltsmin.cc,
spot/misc/bitvect.hh, spot/misc/intvcomp.cc,
spot/misc/satsolver.cc, spot/priv/weight.cc,
spot/ta/taexplicit.cc, spot/taalgos/minimize.cc,
spot/taalgos/reachiter.cc, spot/tl/exclusive.cc,
spot/tl/formula.cc, spot/tl/formula.hh,
spot/tl/mark.cc, spot/tl/mutation.cc,
spot/tl/relabel.cc, spot/tl/remove_x.cc,
spot/tl/simplify.cc, spot/twa/acc.cc,
spot/twa/acc.hh, spot/twa/formula2bdd.cc,
spot/twa/taatgba.cc, spot/twa/taatgba.hh,
spot/twa/twa.hh, spot/twa/twagraph.cc,
spot/twaalgos/bfssteps.cc, spot/twaalgos/canonicalize.cc,
spot/twaalgos/compsusp.cc, spot/twaalgos/copy.cc,
spot/twaalgos/cycles.cc, spot/twaalgos/degen.cc,
spot/twaalgos/determinize.cc, spot/twaalgos/dtwasat.cc,
spot/twaalgos/emptiness.cc, spot/twaalgos/gv04.cc,
spot/twaalgos/hoa.cc, spot/twaalgos/ltl2taa.cc,
spot/twaalgos/ltl2tgba_fm.cc, spot/twaalgos/magic.cc,
spot/twaalgos/mask.hh, spot/twaalgos/minimize.cc,
spot/twaalgos/powerset.cc, spot/twaalgos/product.cc,
spot/twaalgos/randomgraph.cc, spot/twaalgos/reachiter.cc,
spot/twaalgos/relabel.cc, spot/twaalgos/remfin.cc,
spot/twaalgos/sccfilter.cc, spot/twaalgos/se05.cc,
spot/twaalgos/simulation.cc, spot/twaalgos/stutter.cc,
spot/twaalgos/tau03opt.cc, spot/twaalgos/totgba.cc,
spot/twaalgos/word.cc, tests/core/bitvect.cc: here.

* spot/twa/twa.cc, spot/twa/twa.hh: Add a way to
remove named properties.
* spot/twa/twagraph.cc: Clear highlight-edges on operations
that reorder the edge vector.
* spot/twaalgos/randomize.cc, spot/twaalgos/randomize.hh:
Preserve highlighted state, but not highlighted edges.
* spot/twaalgos/hoa.cc: Adjust output of highlight-edge
when the edges are not stored in order.
* tests/core/readsave.test, tests/core/tgbagraph.test,
tests/core/twagraph.cc: More test cases.

Also introduce twa::unregister_ap() and twa_graph::remove_unused_ap()
so that the methods where this behavior is expected can be fixed.

And fix ltsmin::kripke() which did not register APs.

Part of #170.

* spot/twaalgos/hoa.cc: Use apvars() to print all registerd APs.
Throw an exception when printing automata using unregistered APs.
* spot/ltsmin/ltsmin.cc: Call register_ap().
* spot/twa/twa.cc, spot/twa/twa.hh, spot/twa/twagraph.cc,
spot/twa/twagraph.hh (twa::unregister_ap, twa_graph::remove_unused_ap):
New methods.
* spot/tl/exclusive.cc, spot/twaalgos/postproc.cc,
spot/twaalgos/remprop.cc, spot/twaalgos/relabel.cc: Use them.
* tests/core/maskacc.test, tests/core/maskkeep.test,
tests/core/strength.test: Adjust expected results.
* NEWS: Mention those changes.

Also introduce twa::unregister_ap() and twa_graph::remove_unused_ap()
so that the methods where this behavior is expected can be fixed.

And fix ltsmin::kripke() which did not register APs.

Part of #170.

* spot/twaalgos/hoa.cc: Use apvars() to print all registerd APs.
Throw an exception when printing automata using unregistered APs.
* spot/ltsmin/ltsmin.cc: Call register_ap().
* spot/twa/twa.cc, spot/twa/twa.hh, spot/twa/twagraph.cc,
spot/twa/twagraph.hh (twa::unregister_ap, twa_graph::remove_unused_ap):
New methods.
* spot/tl/exclusive.cc, spot/twaalgos/postproc.cc,
spot/twaalgos/remprop.cc, spot/twaalgos/relabel.cc: Use them.
* tests/core/maskacc.test, tests/core/maskkeep.test,
tests/core/strength.test: Adjust expected results.
* NEWS: Mention those changes.

Laurent XU authored Mar 09, 2016 and Alexandre Duret-Lutz committed Mar 10, 2016

* bin/autfilt.cc, bin/common_aoutput.cc, bin/common_aoutput.hh,
bin/common_finput.cc, bin/common_finput.hh, bin/common_hoaread.cc,
bin/common_output.cc, bin/common_output.hh, bin/common_post.cc,
bin/common_post.hh, bin/common_r.hh, bin/common_range.cc,
bin/common_range.hh, bin/common_setup.cc, bin/common_trans.cc,
bin/common_trans.hh, bin/dstar2tgba.cc, bin/genltl.cc,
bin/ltl2tgba.cc, bin/ltl2tgta.cc, bin/ltlcross.cc, bin/ltldo.cc,
bin/ltlfilt.cc, bin/ltlgrind.cc, bin/randaut.cc, bin/randltl.cc,
bin/spot-x.cc, spot/graph/graph.hh, spot/graph/ngraph.hh,
spot/kripke/kripkegraph.hh, spot/ltsmin/ltsmin.cc,
spot/ltsmin/ltsmin.hh, spot/misc/bareword.cc, spot/misc/bitvect.cc,
spot/misc/bitvect.hh, spot/misc/common.hh, spot/misc/escape.cc,
spot/misc/fixpool.hh, spot/misc/formater.cc, spot/misc/hash.hh,
spot/misc/intvcmp2.cc, spot/misc/intvcmp2.hh, spot/misc/intvcomp.cc,
spot/misc/intvcomp.hh, spot/misc/location.hh, spot/misc/minato.cc,
spot/misc/minato.hh, spot/misc/mspool.hh, spot/misc/optionmap.cc,
spot/misc/optionmap.hh, spot/misc/random.cc, spot/misc/random.hh,
spot/misc/satsolver.cc, spot/misc/satsolver.hh, spot/misc/timer.cc,
spot/misc/timer.hh, spot/misc/tmpfile.cc, spot/misc/trival.hh,
spot/parseaut/fmterror.cc, spot/parseaut/parsedecl.hh,
spot/parseaut/public.hh, spot/parsetl/fmterror.cc,
spot/parsetl/parsedecl.hh, spot/priv/accmap.hh, spot/priv/bddalloc.cc,
spot/priv/freelist.cc, spot/priv/trim.cc, spot/priv/weight.cc,
spot/priv/weight.hh, spot/ta/taexplicit.cc, spot/ta/taexplicit.hh,
spot/ta/taproduct.cc, spot/ta/taproduct.hh, spot/ta/tgtaexplicit.cc,
spot/ta/tgtaexplicit.hh, spot/ta/tgtaproduct.cc,
spot/ta/tgtaproduct.hh, spot/taalgos/dot.cc, spot/taalgos/dot.hh,
spot/taalgos/emptinessta.cc, spot/taalgos/emptinessta.hh,
spot/taalgos/minimize.cc, spot/taalgos/tgba2ta.cc,
spot/taalgos/tgba2ta.hh, spot/tl/apcollect.cc, spot/tl/contain.cc,
spot/tl/contain.hh, spot/tl/dot.cc, spot/tl/exclusive.cc,
spot/tl/exclusive.hh, spot/tl/formula.cc, spot/tl/formula.hh,
spot/tl/length.cc, spot/tl/mark.cc, spot/tl/mutation.cc,
spot/tl/mutation.hh, spot/tl/parse.hh, spot/tl/print.cc,
spot/tl/print.hh, spot/tl/randomltl.cc, spot/tl/randomltl.hh,
spot/tl/relabel.cc, spot/tl/relabel.hh, spot/tl/remove_x.cc,
spot/tl/simplify.cc, spot/tl/simplify.hh, spot/tl/snf.cc,
spot/tl/snf.hh, spot/tl/unabbrev.cc, spot/tl/unabbrev.hh,
spot/twa/acc.cc, spot/twa/acc.hh, spot/twa/bdddict.cc,
spot/twa/bdddict.hh, spot/twa/bddprint.cc, spot/twa/formula2bdd.cc,
spot/twa/formula2bdd.hh, spot/twa/taatgba.cc, spot/twa/taatgba.hh,
spot/twa/twa.cc, spot/twa/twa.hh, spot/twa/twagraph.cc,
spot/twa/twagraph.hh, spot/twa/twaproduct.cc, spot/twa/twaproduct.hh,
spot/twaalgos/are_isomorphic.cc, spot/twaalgos/are_isomorphic.hh,
spot/twaalgos/bfssteps.cc, spot/twaalgos/bfssteps.hh,
spot/twaalgos/cleanacc.cc, spot/twaalgos/complete.cc,
spot/twaalgos/compsusp.cc, spot/twaalgos/compsusp.hh,
spot/twaalgos/copy.cc, spot/twaalgos/cycles.cc,
spot/twaalgos/cycles.hh, spot/twaalgos/degen.cc,
spot/twaalgos/degen.hh, spot/twaalgos/determinize.cc,
spot/twaalgos/determinize.hh, spot/twaalgos/dot.cc,
spot/twaalgos/dot.hh, spot/twaalgos/dtbasat.cc,
spot/twaalgos/dtbasat.hh, spot/twaalgos/dtwasat.cc,
spot/twaalgos/dtwasat.hh, spot/twaalgos/emptiness.cc,
spot/twaalgos/emptiness.hh, spot/twaalgos/emptiness_stats.hh,
spot/twaalgos/gtec/ce.cc, spot/twaalgos/gtec/ce.hh,
spot/twaalgos/gtec/gtec.cc, spot/twaalgos/gtec/gtec.hh,
spot/twaalgos/gtec/sccstack.cc, spot/twaalgos/gtec/status.cc,
spot/twaalgos/gv04.cc, spot/twaalgos/hoa.cc, spot/twaalgos/hoa.hh,
spot/twaalgos/isdet.cc, spot/twaalgos/isunamb.cc,
spot/twaalgos/isweakscc.cc, spot/twaalgos/lbtt.cc,
spot/twaalgos/lbtt.hh, spot/twaalgos/ltl2taa.cc,
spot/twaalgos/ltl2taa.hh, spot/twaalgos/ltl2tgba_fm.cc,
spot/twaalgos/ltl2tgba_fm.hh, spot/twaalgos/magic.cc,
spot/twaalgos/magic.hh, spot/twaalgos/mask.cc, spot/twaalgos/mask.hh,
spot/twaalgos/minimize.cc, spot/twaalgos/minimize.hh,
spot/twaalgos/ndfs_result.hxx, spot/twaalgos/neverclaim.cc,
spot/twaalgos/neverclaim.hh, spot/twaalgos/postproc.cc,
spot/twaalgos/postproc.hh, spot/twaalgos/powerset.cc,
spot/twaalgos/powerset.hh, spot/twaalgos/product.cc,
spot/twaalgos/product.hh, spot/twaalgos/projrun.cc,
spot/twaalgos/projrun.hh, spot/twaalgos/randomgraph.cc,
spot/twaalgos/randomgraph.hh, spot/twaalgos/randomize.cc,
spot/twaalgos/randomize.hh, spot/twaalgos/reachiter.cc,
spot/twaalgos/reachiter.hh, spot/twaalgos/relabel.cc,
spot/twaalgos/relabel.hh, spot/twaalgos/remfin.cc,
spot/twaalgos/remprop.cc, spot/twaalgos/sbacc.cc,
spot/twaalgos/sccfilter.cc, spot/twaalgos/sccfilter.hh,
spot/twaalgos/sccinfo.cc, spot/twaalgos/sccinfo.hh,
spot/twaalgos/se05.cc, spot/twaalgos/se05.hh,
spot/twaalgos/sepsets.cc, spot/twaalgos/simulation.cc,
spot/twaalgos/simulation.hh, spot/twaalgos/stats.cc,
spot/twaalgos/stats.hh, spot/twaalgos/strength.cc,
spot/twaalgos/strength.hh, spot/twaalgos/stripacc.cc,
spot/twaalgos/stutter.cc, spot/twaalgos/stutter.hh,
spot/twaalgos/tau03.cc, spot/twaalgos/tau03opt.cc,
spot/twaalgos/tau03opt.hh, spot/twaalgos/totgba.cc,
spot/twaalgos/translate.cc, spot/twaalgos/word.cc, tests/core/acc.cc,
tests/core/bitvect.cc, tests/core/checkpsl.cc, tests/core/checkta.cc,
tests/core/consterm.cc, tests/core/emptchk.cc, tests/core/equalsf.cc,
tests/core/graph.cc, tests/core/ikwiad.cc, tests/core/intvcmp2.cc,
tests/core/intvcomp.cc, tests/core/kind.cc, tests/core/kripkecat.cc,
tests/core/ltlrel.cc, tests/core/ngraph.cc, tests/core/randtgba.cc,
tests/core/readltl.cc, tests/core/reduc.cc, tests/core/safra.cc,
tests/core/syntimpl.cc, tests/ltsmin/modelcheck.cc: Replace tabulars by
8 spaces.
* tests/sanity/style.test: Add checks for no tabulars in *.cc *.hh *.hxx

* spot/twa/twagraph.cc, spot/twa/twagraph.hh,
tests/core/tgbagraph.test, tests/core/twagraph.cc,
NEWS: here.

* NEWS: Mention the change.
* src/: Rename as ...
* spot/: ... this, adjust all headers to include <spot/...> instead of
"...", and adjust all Makefile.am to search headers from the top-level
directory.
* HACKING: Add conventions about #include.
* spot/sanity/style.test: Add a few more grep to catch cases
that do not follow these conventions.
* .gitignore, Makefile.am, README, bench/stutter/Makefile.am,
bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, configure.ac,
debian/rules, doc/Doxyfile.in, doc/Makefile.am,
doc/org/.dir-locals.el.in, doc/org/g++wrap.in, doc/org/init.el.in,
doc/org/tut01.org, doc/org/tut02.org, doc/org/tut03.org,
doc/org/tut10.org, doc/org/tut20.org, doc/org/tut21.org,
doc/org/tut22.org, doc/org/tut30.org, iface/ltsmin/Makefile.am,
iface/ltsmin/kripke.test, iface/ltsmin/ltsmin.cc,
iface/ltsmin/ltsmin.hh, iface/ltsmin/modelcheck.cc,
wrap/python/Makefile.am, wrap/python/ajax/spotcgi.in,
wrap/python/spot_impl.i, wrap/python/tests/ltl2tgba.py,
wrap/python/tests/randgen.py, wrap/python/tests/run.in: Adjust.

* NEWS: Mention it.
* bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, doc/mainpage.dox,
doc/org/tut01.org, doc/org/tut02.org, doc/org/tut10.org, doc/tl/tl.tex,
iface/ltsmin/ltsmin.cc, iface/ltsmin/ltsmin.hh,
iface/ltsmin/modelcheck.cc, src/bin/autfilt.cc,
src/bin/common_aoutput.cc, src/bin/common_aoutput.hh,
src/bin/common_finput.cc, src/bin/common_finput.hh,
src/bin/common_output.cc, src/bin/common_output.hh, src/bin/common_r.hh,
src/bin/common_trans.cc, src/bin/common_trans.hh, src/bin/dstar2tgba.cc,
src/bin/genltl.cc, src/bin/ltl2tgba.cc, src/bin/ltl2tgta.cc,
src/bin/ltlcross.cc, src/bin/ltldo.cc, src/bin/ltlfilt.cc,
src/bin/ltlgrind.cc, src/bin/randaut.cc, src/bin/randltl.cc,
src/kripke/kripkeexplicit.cc, src/kripke/kripkeexplicit.hh,
src/kripkeparse/kripkeparse.yy, src/kripkeparse/public.hh,
src/ltlparse/fmterror.cc, src/ltlparse/ltlparse.yy,
src/ltlparse/ltlscan.ll, src/ltlparse/parsedecl.hh,
src/ltlparse/public.hh, src/parseaut/parseaut.yy,
src/parseaut/public.hh, src/tests/checkpsl.cc, src/tests/checkta.cc,
src/tests/complementation.cc, src/tests/consterm.cc,
src/tests/emptchk.cc, src/tests/equalsf.cc, src/tests/ikwiad.cc,
src/tests/kind.cc, src/tests/length.cc, src/tests/ltlprod.cc,
src/tests/ltlrel.cc, src/tests/parse.test,
src/tests/parse_print_test.cc, src/tests/randtgba.cc,
src/tests/readltl.cc, src/tests/reduc.cc, src/tests/syntimpl.cc,
src/tests/taatgba.cc, src/tests/tostring.cc, src/tests/tostring.test,
src/tl/apcollect.cc, src/tl/apcollect.hh, src/tl/contain.cc,
src/tl/contain.hh, src/tl/declenv.cc, src/tl/declenv.hh,
src/tl/defaultenv.cc, src/tl/defaultenv.hh, src/tl/dot.cc,
src/tl/dot.hh, src/tl/environment.hh, src/tl/exclusive.cc,
src/tl/exclusive.hh, src/tl/formula.cc, src/tl/formula.hh,
src/tl/length.cc, src/tl/length.hh, src/tl/mark.cc, src/tl/mark.hh,
src/tl/mutation.cc, src/tl/mutation.hh, src/tl/nenoform.cc,
src/tl/nenoform.hh, src/tl/print.cc, src/tl/print.hh,
src/tl/randomltl.cc, src/tl/randomltl.hh, src/tl/relabel.cc,
src/tl/relabel.hh, src/tl/remove_x.cc, src/tl/remove_x.hh,
src/tl/simpfg.cc, src/tl/simpfg.hh, src/tl/simplify.cc,
src/tl/simplify.hh, src/tl/snf.cc, src/tl/snf.hh, src/tl/unabbrev.cc,
src/tl/unabbrev.hh, src/twa/bdddict.cc, src/twa/bdddict.hh,
src/twa/bddprint.cc, src/twa/formula2bdd.cc, src/twa/formula2bdd.hh,
src/twa/taatgba.cc, src/twa/taatgba.hh, src/twa/twa.hh,
src/twa/twagraph.cc, src/twa/twagraph.hh, src/twaalgos/compsusp.cc,
src/twaalgos/compsusp.hh, src/twaalgos/ltl2taa.cc,
src/twaalgos/ltl2taa.hh, src/twaalgos/ltl2tgba_fm.cc,
src/twaalgos/ltl2tgba_fm.hh, src/twaalgos/minimize.cc,
src/twaalgos/minimize.hh, src/twaalgos/neverclaim.cc,
src/twaalgos/postproc.cc, src/twaalgos/postproc.hh,
src/twaalgos/powerset.cc, src/twaalgos/powerset.hh,
src/twaalgos/randomgraph.cc, src/twaalgos/randomgraph.hh,
src/twaalgos/relabel.cc, src/twaalgos/relabel.hh,
src/twaalgos/remprop.cc, src/twaalgos/remprop.hh, src/twaalgos/stats.cc,
src/twaalgos/stats.hh, src/twaalgos/stutter.cc, src/twaalgos/stutter.hh,
src/twaalgos/translate.cc, src/twaalgos/translate.hh,
wrap/python/spot_impl.i: Remove the ltl namespace.

The ltl prefix does not make a lot of sens anymore (since we
support psl as well).  ltlast/ and ltlenv/ were almost empty.
And ltlvisit/ did not contain any visitor anymore.

* src/ltlvisit/, src/ltlast/, src/ltlenv/: Merge into...
* src/tl/: ...this.
* NEWS: Mention the change.
* README, bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, configure.ac,
doc/org/tut01.org, doc/org/tut02.org, doc/org/tut10.org, doc/tl/tl.tex,
iface/ltsmin/ltsmin.hh, iface/ltsmin/modelcheck.cc, src/Makefile.am,
src/bin/autfilt.cc, src/bin/common_output.cc, src/bin/common_output.hh,
src/bin/common_r.hh, src/bin/common_trans.cc, src/bin/genltl.cc,
src/bin/ltl2tgba.cc, src/bin/ltl2tgta.cc, src/bin/ltlcross.cc,
src/bin/ltldo.cc, src/bin/ltlfilt.cc, src/bin/ltlgrind.cc,
src/bin/randltl.cc, src/kripke/kripkeexplicit.hh,
src/kripkeparse/public.hh, src/parseaut/public.hh, src/priv/accmap.hh,
src/ta/taexplicit.hh, src/ta/tgtaexplicit.hh, src/tests/equalsf.cc,
src/tests/ikwiad.cc, src/tests/length.cc, src/tests/ltlrel.cc,
src/tests/randtgba.cc, src/tests/readltl.cc, src/tests/reduc.cc,
src/tests/syntimpl.cc, src/tests/taatgba.cc, src/tests/tostring.cc,
src/tests/twagraph.cc, src/twa/acc.hh, src/twa/bdddict.cc,
src/twa/bdddict.hh, src/twa/bddprint.cc, src/twa/taatgba.cc,
src/twa/taatgba.hh, src/twa/twa.hh, src/twa/twagraph.cc,
src/twa/twagraph.hh, src/twa/twasafracomplement.cc,
src/twaalgos/compsusp.cc, src/twaalgos/compsusp.hh,
src/twaalgos/dtgbasat.cc, src/twaalgos/hoa.cc,
src/twaalgos/isweakscc.cc, src/twaalgos/lbtt.cc,
src/twaalgos/ltl2taa.cc, src/twaalgos/ltl2taa.hh,
src/twaalgos/ltl2tgba_fm.cc, src/twaalgos/ltl2tgba_fm.hh,
src/twaalgos/minimize.hh, src/twaalgos/neverclaim.cc,
src/twaalgos/randomgraph.hh, src/twaalgos/relabel.hh,
src/twaalgos/remprop.hh, src/twaalgos/stats.cc, src/twaalgos/stutter.cc,
src/twaalgos/translate.hh, wrap/python/spot_impl.i,
src/ltlparse/ltlparse.yy, src/ltlparse/public.hh: Adjust.

Flatten the formula ltl::formula hiearchy into a single ltl::vnode that
has an enumerator to distinguish the types of node, and a common
interface to access children, update reference counts, etc.  The
ltl::formula class is now a thin wrapper around an ltl::vnode pointer to
keep track of reference counts automatically.  Visitor are not used
anymore; we now have map() and traversor() methods that are more
concise.

This basically fixes #43, but should be followed by some fine tuning
that should now be localized to the formula.hh and formula.cc files.

Some statistics about this patch.  I started working on it on Sep 9, had
a first compiling version two weeks later on Sep 22, and it then took 5
days to fixes the ~70 distincts bugs that were introduced during the
conversion.  About 13200 lines were modified, and one third of those
were removed.

* src/ltlast/formula.cc, src/ltlast/formula.hh: Complete rewrite,
including what was in separate nearby files.
* src/ltlast/allnodes.hh, src/ltlast/atomic_prop.cc,
src/ltlast/atomic_prop.hh, src/ltlast/binop.cc, src/ltlast/binop.hh,
src/ltlast/bunop.cc, src/ltlast/bunop.hh, src/ltlast/constant.cc,
src/ltlast/constant.hh, src/ltlast/multop.cc, src/ltlast/multop.hh,
src/ltlast/unop.cc, src/ltlast/unop.hh, src/ltlvisit/dump.cc,
src/ltlvisit/dump.hh, src/ltlast/predecl.hh: Delete these files.  Their
feature have been merged in formula.hh and formula.cc.
* src/ltlast/visitor.hh, src/ltlvisit/clone.cc, src/ltlvisit/clone.hh,
src/ltlvisit/dump.hh, src/ltlvisit/postfix.cc, src/ltlvisit/postfix.hh:
Delete these files, as we do not use visitors anymore.
* bench/stutter/stutter_invariance_formulas.cc,
bench/stutter/stutter_invariance_randomgraph.cc, doc/org/tut01.org,
doc/org/tut02.org, doc/org/tut10.org, doc/org/tut22.org,
iface/ltsmin/ltsmin.cc, iface/ltsmin/ltsmin.hh,
iface/ltsmin/modelcheck.cc, src/bin/autfilt.cc,
src/bin/common_aoutput.cc, src/bin/common_aoutput.hh,
src/bin/common_finput.cc, src/bin/common_finput.hh,
src/bin/common_output.cc, src/bin/common_output.hh,
src/bin/common_trans.cc, src/bin/common_trans.hh, src/bin/dstar2tgba.cc,
src/bin/genltl.cc, src/bin/ltl2tgba.cc, src/bin/ltl2tgta.cc,
src/bin/ltlcross.cc, src/bin/ltldo.cc, src/bin/ltlfilt.cc,
src/bin/ltlgrind.cc, src/bin/randaut.cc, src/bin/randltl.cc,
src/kripke/kripkeexplicit.cc, src/kripke/kripkeexplicit.hh,
src/kripkeparse/kripkeparse.yy, src/ltlast/Makefile.am,
src/ltlenv/declenv.cc, src/ltlenv/declenv.hh, src/ltlenv/defaultenv.cc,
src/ltlenv/defaultenv.hh, src/ltlenv/environment.hh,
src/ltlparse/ltlparse.yy, src/ltlparse/public.hh,
src/ltlvisit/Makefile.am, src/ltlvisit/apcollect.cc,
src/ltlvisit/apcollect.hh, src/ltlvisit/contain.cc,
src/ltlvisit/contain.hh, src/ltlvisit/dot.cc, src/ltlvisit/dot.hh,
src/ltlvisit/exclusive.cc, src/ltlvisit/exclusive.hh,
src/ltlvisit/length.cc, src/ltlvisit/length.hh, src/ltlvisit/mark.cc,
src/ltlvisit/mark.hh, src/ltlvisit/mutation.cc,
src/ltlvisit/mutation.hh, src/ltlvisit/nenoform.cc,
src/ltlvisit/nenoform.hh, src/ltlvisit/print.cc, src/ltlvisit/print.hh,
src/ltlvisit/randomltl.cc, src/ltlvisit/randomltl.hh,
src/ltlvisit/relabel.cc, src/ltlvisit/relabel.hh,
src/ltlvisit/remove_x.cc, src/ltlvisit/remove_x.hh,
src/ltlvisit/simpfg.cc, src/ltlvisit/simpfg.hh,
src/ltlvisit/simplify.cc, src/ltlvisit/simplify.hh, src/ltlvisit/snf.cc,
src/ltlvisit/snf.hh, src/ltlvisit/unabbrev.cc, src/ltlvisit/unabbrev.hh,
src/parseaut/parseaut.yy, src/ta/taexplicit.cc, src/ta/tgtaexplicit.cc,
src/taalgos/minimize.cc, src/taalgos/tgba2ta.cc, src/tests/bare.test,
src/tests/checkpsl.cc, src/tests/checkta.cc,
src/tests/complementation.cc, src/tests/consterm.cc,
src/tests/emptchk.cc, src/tests/equalsf.cc, src/tests/ikwiad.cc,
src/tests/isop.test, src/tests/kind.cc, src/tests/length.cc,
src/tests/ltldo.test, src/tests/ltlfilt.test, src/tests/ltlgrind.test,
src/tests/ltlprod.cc, src/tests/ltlrel.cc,
src/tests/parse_print_test.cc, src/tests/parseaut.test,
src/tests/parseerr.test, src/tests/randtgba.cc, src/tests/readltl.cc,
src/tests/reduc.cc, src/tests/syntimpl.cc, src/tests/taatgba.cc,
src/tests/tostring.cc, src/tests/twagraph.cc, src/tests/utf8.test,
src/twa/acc.cc, src/twa/bdddict.cc, src/twa/bdddict.hh,
src/twa/bddprint.cc, src/twa/formula2bdd.cc, src/twa/formula2bdd.hh,
src/twa/taatgba.cc, src/twa/taatgba.hh, src/twa/twa.cc, src/twa/twa.hh
src/twa/twagraph.cc, src/twa/twagraph.hh, src/twa/twasafracomplement.cc,
src/twaalgos/compsusp.cc, src/twaalgos/compsusp.hh,
src/twaalgos/dtgbasat.cc, src/twaalgos/hoa.cc, src/twaalgos/lbtt.cc,
src/twaalgos/ltl2taa.cc, src/twaalgos/ltl2taa.hh,
src/twaalgos/ltl2tgba_fm.cc, src/twaalgos/ltl2tgba_fm.hh,
src/twaalgos/minimize.cc, src/twaalgos/minimize.hh,
src/twaalgos/neverclaim.cc, src/twaalgos/postproc.cc,
src/twaalgos/postproc.hh, src/twaalgos/powerset.cc,
src/twaalgos/powerset.hh, src/twaalgos/randomgraph.cc,
src/twaalgos/remprop.cc, src/twaalgos/remprop.hh, src/twaalgos/stats.cc,
src/twaalgos/stats.hh, src/twaalgos/stutter.cc, src/twaalgos/stutter.hh,
src/twaalgos/translate.cc, src/twaalgos/translate.hh,
wrap/python/ajax/spotcgi.in, wrap/python/spot.py,
wrap/python/spot_impl.i, wrap/python/Makefile.am,
wrap/python/tests/automata-io.ipynb, wrap/python/tests/formulas.ipynb,
wrap/python/tests/ltl2tgba.py, wrap/python/tests/ltlparse.py,
wrap/python/tests/ltlsimple.py, wrap/python/tests/randltl.ipynb: Adjust
to use the new interface.
* src/sanity/style.test: Accept more C++11 patterns.
* NEWS: Mention the change.

* src/twa/twagraph.hh (namer): Use a template alias instead
of a trait.
* src/twa/twagraph.cc, src/parseaut/parseaut.yy,
src/twaalgos/ltl2tgba_fm.cc: Adjust.

And in fact, rename most "trans*" as "edges*", because that what they
really are.

* src/bin/autfilt.cc, src/bin/ltlcross.cc, src/bin/randaut.cc,
src/dstarparse/dra2ba.cc, src/dstarparse/dstarparse.yy,
src/dstarparse/nra2nba.cc, src/dstarparse/nsa2tgba.cc,
src/graph/graph.hh, src/graph/ngraph.hh, src/ltlvisit/exclusive.cc,
src/parseaut/parseaut.yy, src/tests/complementation.cc,
src/tests/graph.cc, src/tests/ltl2tgba.cc, src/tests/ngraph.cc,
src/tests/twagraph.cc, src/twa/twagraph.cc, src/twa/twagraph.hh,
src/twa/twamask.hh, src/twaalgos/are_isomorphic.cc,
src/twaalgos/are_isomorphic.hh, src/twaalgos/canonicalize.cc,
src/twaalgos/cleanacc.cc, src/twaalgos/complete.cc,
src/twaalgos/compsusp.cc, src/twaalgos/cycles.cc,
src/twaalgos/degen.cc, src/twaalgos/dot.cc, src/twaalgos/dtbasat.cc,
src/twaalgos/dtgbacomp.cc, src/twaalgos/dtgbasat.cc,
src/twaalgos/dupexp.cc, src/twaalgos/emptiness.cc,
src/twaalgos/isunamb.cc, src/twaalgos/isweakscc.cc,
src/twaalgos/ltl2tgba_fm.cc, src/twaalgos/mask.hh,
src/twaalgos/minimize.cc, src/twaalgos/postproc.cc,
src/twaalgos/powerset.cc, src/twaalgos/product.cc,
src/twaalgos/randomgraph.cc, src/twaalgos/randomize.cc,
src/twaalgos/randomize.hh, src/twaalgos/relabel.cc,
src/twaalgos/remfin.cc, src/twaalgos/safety.cc, src/twaalgos/sbacc.cc,
src/twaalgos/sccfilter.cc, src/twaalgos/sepsets.cc,
src/twaalgos/simulation.cc, src/twaalgos/stutter.cc,
src/twaalgos/totgba.cc: Rename these.

This actually performs three related changes, but separating them
would be quite inconvenient.

1) rename tostring.hh to print.hh a welcome side-effect is that
I could fix several files that included this file for not reason.

2) de-overload some of the to_string functions, and rename them
as follow:

  to_string -> print_psl, print_sere, str_psl, str_sere
  to_utf8_string -> print_utf8_psl, print_utf8_sere,
                    str_utf8_psl, str_utf8_sere
  to_spin_string -> print_spin_ltl, str_spin_ltl
  to_wring_string -> print_wring_ltl, str_wing_ltl
  to_lbt_string -> print_lbt_ltl, str_lbt_ltl
  to_latex_string -> print_latex_psl, str_latex_psl
  to_sclatex_string -> print_sclatex_psl, str_sclatex_psl

Now it is clearer what these functions do, and their restrictions.

3) all those print_* functions now take the stream to write onto
as their first argument.  This fixes #88.

* src/ltlvisit/tostring.cc, src/ltlvisit/tostring.hh: Rename into...
* src/ltlvisit/print.cc, src/ltlvisit/print.hh: ... those, and make
the changes listed above.
* doc/org/tut01.org, src/bin/common_output.cc,
src/bin/common_trans.cc, src/bin/ltl2tgba.cc, src/bin/ltl2tgta.cc,
src/bin/ltlcross.cc, src/bin/ltldo.cc, src/bin/ltlfilt.cc,
src/bin/randltl.cc, src/ltlparse/ltlparse.yy,
src/ltlvisit/Makefile.am, src/ltlvisit/mark.cc,
src/ltlvisit/relabel.cc, src/ltlvisit/simplify.cc,
src/ltlvisit/snf.cc, src/ta/taexplicit.cc, src/ta/tgtaexplicit.cc,
src/taalgos/tgba2ta.cc, src/tests/equalsf.cc, src/tests/ltl2tgba.cc,
src/tests/ltlrel.cc, src/tests/randtgba.cc, src/tests/reduc.cc,
src/tests/syntimpl.cc, src/tests/tostring.cc, src/twa/bdddict.cc,
src/twa/bddprint.cc, src/twa/taatgba.cc, src/twa/taatgba.hh,
src/twa/twagraph.cc, src/twaalgos/compsusp.cc, src/twaalgos/lbtt.cc,
src/twaalgos/ltl2taa.cc, src/twaalgos/ltl2tgba_fm.cc,
src/twaalgos/neverclaim.cc, src/twaalgos/remprop.cc,
src/twaalgos/stats.cc, wrap/python/ajax/spot.in, wrap/python/spot.py,
wrap/python/spot_impl.i: Adjust.

* src/twa/twagraph.cc, src/twa/twagraph.hh (create_formula_namer,
release_formula_namer): New functions.
* src/twaalgos/ltl2tgba_fm.cc: Use it.

Automatic mass renaming.

* src/graphtest/tgbagraph.cc, src/tgba/acc.cc, src/tgba/acc.hh,
src/tgba/bdddict.cc, src/tgba/bdddict.hh, src/tgba/bddprint.cc,
src/tgba/bddprint.hh, src/tgba/formula2bdd.cc,
src/tgba/formula2bdd.hh, src/tgba/fwd.hh, src/tgba/Makefile.am,
src/tgba/taatgba.cc, src/tgba/taatgba.hh, src/tgba/tgba.cc,
src/tgba/tgbagraph.cc, src/tgba/tgbagraph.hh, src/tgba/tgba.hh,
src/tgba/tgbamask.cc, src/tgba/tgbamask.hh, src/tgba/tgbaproduct.cc,
src/tgba/tgbaproduct.hh, src/tgba/tgbaproxy.cc, src/tgba/tgbaproxy.hh,
src/tgba/tgbasafracomplement.cc, src/tgba/tgbasafracomplement.hh,
src/tgba/.cvsignore: Rename as...
* src/graphtest/twagraph.cc, src/twa/acc.cc, src/twa/acc.hh,
src/twa/bdddict.cc, src/twa/bdddict.hh, src/twa/bddprint.cc,
src/twa/bddprint.hh, src/twa/formula2bdd.cc, src/twa/formula2bdd.hh,
src/twa/fwd.hh, src/twa/Makefile.am, src/twa/taatgba.cc,
src/twa/taatgba.hh, src/twa/twa.cc, src/twa/twagraph.cc,
src/twa/twagraph.hh, src/twa/twa.hh, src/twa/twamask.cc,
src/twa/twamask.hh, src/twa/twaproduct.cc, src/twa/twaproduct.hh,
src/twa/twaproxy.cc, src/twa/twaproxy.hh,
src/twa/twasafracomplement.cc, src/twa/twasafracomplement.hh,
src/twa/.cvsignore: ... these.
* README, bench/stutter/stutter_invariance_randomgraph.cc,
configure.ac, iface/ltsmin/modelcheck.cc, src/Makefile.am,
src/bin/common_aoutput.cc, src/bin/common_conv.hh,
src/bin/common_trans.hh, src/bin/dstar2tgba.cc, src/bin/ltl2tgta.cc,
src/bin/randaut.cc, src/dstarparse/dra2ba.cc,
src/dstarparse/public.hh, src/graphtest/Makefile.am,
src/graphtest/ngraph.cc, src/hoaparse/hoaparse.yy,
src/hoaparse/public.hh, src/kripke/fairkripke.hh,
src/kripke/kripkeexplicit.cc, src/kripke/kripkeprint.cc,
src/kripkeparse/kripkeparse.yy, src/ltlvisit/apcollect.cc,
src/ltlvisit/apcollect.hh, src/ltlvisit/exclusive.hh,
src/ltlvisit/simplify.cc, src/ltlvisit/simplify.hh,
src/priv/accmap.hh, src/ta/ta.hh, src/ta/taexplicit.cc,
src/ta/taexplicit.hh, src/ta/tgta.hh, src/ta/tgtaexplicit.cc,
src/ta/tgtaexplicit.hh, src/ta/tgtaproduct.hh, src/taalgos/dotty.cc,
src/taalgos/emptinessta.cc, src/taalgos/minimize.cc,
src/taalgos/tgba2ta.cc, src/taalgos/tgba2ta.hh,
src/tgbaalgos/are_isomorphic.cc, src/tgbaalgos/are_isomorphic.hh,
src/tgbaalgos/bfssteps.cc, src/tgbaalgos/canonicalize.cc,
src/tgbaalgos/canonicalize.hh, src/tgbaalgos/cleanacc.hh,
src/tgbaalgos/complete.hh, src/tgbaalgos/compsusp.cc,
src/tgbaalgos/compsusp.hh, src/tgbaalgos/degen.cc,
src/tgbaalgos/degen.hh, src/tgbaalgos/dotty.cc,
src/tgbaalgos/dotty.hh, src/tgbaalgos/dtbasat.cc,
src/tgbaalgos/dtbasat.hh, src/tgbaalgos/dtgbacomp.hh,
src/tgbaalgos/dtgbasat.cc, src/tgbaalgos/dtgbasat.hh,
src/tgbaalgos/dupexp.cc, src/tgbaalgos/dupexp.hh,
src/tgbaalgos/emptiness.cc, src/tgbaalgos/emptiness.hh,
src/tgbaalgos/gtec/sccstack.hh, src/tgbaalgos/gtec/status.hh,
src/tgbaalgos/gv04.cc, src/tgbaalgos/gv04.hh, src/tgbaalgos/hoa.cc,
src/tgbaalgos/hoa.hh, src/tgbaalgos/isdet.hh, src/tgbaalgos/lbtt.cc,
src/tgbaalgos/lbtt.hh, src/tgbaalgos/ltl2taa.hh,
src/tgbaalgos/ltl2tgba_fm.cc, src/tgbaalgos/ltl2tgba_fm.hh,
src/tgbaalgos/magic.cc, src/tgbaalgos/magic.hh, src/tgbaalgos/mask.hh,
src/tgbaalgos/minimize.hh, src/tgbaalgos/ndfs_result.hxx,
src/tgbaalgos/neverclaim.cc, src/tgbaalgos/neverclaim.hh,
src/tgbaalgos/postproc.hh, src/tgbaalgos/powerset.cc,
src/tgbaalgos/powerset.hh, src/tgbaalgos/product.cc,
src/tgbaalgos/product.hh, src/tgbaalgos/projrun.cc,
src/tgbaalgos/projrun.hh, src/tgbaalgos/randomgraph.cc,
src/tgbaalgos/randomgraph.hh, src/tgbaalgos/randomize.hh,
src/tgbaalgos/reachiter.hh, src/tgbaalgos/reducerun.cc,
src/tgbaalgos/reducerun.hh, src/tgbaalgos/relabel.hh,
src/tgbaalgos/remfin.hh, src/tgbaalgos/remprop.hh,
src/tgbaalgos/replayrun.cc, src/tgbaalgos/replayrun.hh,
src/tgbaalgos/sbacc.hh, src/tgbaalgos/scc.cc, src/tgbaalgos/scc.hh,
src/tgbaalgos/sccfilter.hh, src/tgbaalgos/sccinfo.cc,
src/tgbaalgos/sccinfo.hh, src/tgbaalgos/se05.cc,
src/tgbaalgos/se05.hh, src/tgbaalgos/simulation.cc,
src/tgbaalgos/simulation.hh, src/tgbaalgos/stats.cc,
src/tgbaalgos/stats.hh, src/tgbaalgos/stripacc.hh,
src/tgbaalgos/stutter.cc, src/tgbaalgos/stutter.hh,
src/tgbaalgos/tau03.cc, src/tgbaalgos/tau03.hh,
src/tgbaalgos/tau03opt.cc, src/tgbaalgos/tau03opt.hh,
src/tgbaalgos/totgba.cc, src/tgbaalgos/totgba.hh,
src/tgbaalgos/weight.hh, src/tgbaalgos/word.cc, src/tgbatest/acc.cc,
src/tgbatest/complementation.cc, src/tgbatest/emptchk.cc,
src/tgbatest/ltl2tgba.cc, src/tgbatest/taatgba.cc,
wrap/python/spot_impl.i: Adjust.

Automatic mass renaming.

* src/bin/autfilt.cc, src/bin/common_aoutput.cc,
src/bin/common_aoutput.hh, src/bin/common_conv.cc,
src/bin/common_conv.hh, src/bin/common_output.hh, src/bin/dstar2tgba.cc,
src/bin/ltlcross.cc, src/bin/ltldo.cc, src/bin/randaut.cc,
src/dstarparse/dra2ba.cc, src/dstarparse/dstar2tgba.cc,
src/dstarparse/dstarparse.yy, src/dstarparse/nra2nba.cc,
src/dstarparse/nsa2tgba.cc, src/dstarparse/public.hh,
src/graphtest/tgbagraph.cc, src/hoaparse/hoaparse.yy,
src/hoaparse/public.hh, src/ltlvisit/contain.hh,
src/ltlvisit/exclusive.cc, src/ltlvisit/exclusive.hh,
src/priv/accmap.hh, src/taalgos/minimize.cc, src/tgba/fwd.hh,
src/tgba/tgba.cc, src/tgba/tgbagraph.cc, src/tgba/tgbagraph.hh,
src/tgba/tgbasafracomplement.cc, src/tgba/tgbasafracomplement.hh,
src/tgbaalgos/are_isomorphic.cc, src/tgbaalgos/are_isomorphic.hh,
src/tgbaalgos/canonicalize.cc, src/tgbaalgos/canonicalize.hh,
src/tgbaalgos/cleanacc.cc, src/tgbaalgos/cleanacc.hh,
src/tgbaalgos/complete.cc, src/tgbaalgos/complete.hh,
src/tgbaalgos/compsusp.cc, src/tgbaalgos/compsusp.hh,
src/tgbaalgos/cycles.hh, src/tgbaalgos/degen.cc, src/tgbaalgos/degen.hh,
src/tgbaalgos/dotty.cc, src/tgbaalgos/dtbasat.cc,
src/tgbaalgos/dtbasat.hh, src/tgbaalgos/dtgbacomp.cc,
src/tgbaalgos/dtgbacomp.hh, src/tgbaalgos/dtgbasat.cc,
src/tgbaalgos/dtgbasat.hh, src/tgbaalgos/dupexp.cc,
src/tgbaalgos/dupexp.hh, src/tgbaalgos/emptiness.cc,
src/tgbaalgos/emptiness.hh, src/tgbaalgos/hoa.cc,
src/tgbaalgos/isdet.cc, src/tgbaalgos/isdet.hh, src/tgbaalgos/lbtt.cc,
src/tgbaalgos/ltl2tgba_fm.cc, src/tgbaalgos/ltl2tgba_fm.hh,
src/tgbaalgos/mask.cc, src/tgbaalgos/mask.hh, src/tgbaalgos/minimize.cc,
src/tgbaalgos/minimize.hh, src/tgbaalgos/neverclaim.cc,
src/tgbaalgos/postproc.cc, src/tgbaalgos/postproc.hh,
src/tgbaalgos/powerset.cc, src/tgbaalgos/powerset.hh,
src/tgbaalgos/product.cc, src/tgbaalgos/product.hh,
src/tgbaalgos/randomgraph.cc, src/tgbaalgos/randomgraph.hh,
src/tgbaalgos/randomize.cc, src/tgbaalgos/randomize.hh,
src/tgbaalgos/relabel.cc, src/tgbaalgos/relabel.hh,
src/tgbaalgos/remfin.cc, src/tgbaalgos/remfin.hh,
src/tgbaalgos/remprop.cc, src/tgbaalgos/remprop.hh,
src/tgbaalgos/safety.cc, src/tgbaalgos/safety.hh,
src/tgbaalgos/sbacc.cc, src/tgbaalgos/sbacc.hh,
src/tgbaalgos/sccfilter.cc, src/tgbaalgos/sccfilter.hh,
src/tgbaalgos/sccinfo.cc, src/tgbaalgos/sccinfo.hh,
src/tgbaalgos/simulation.cc, src/tgbaalgos/simulation.hh,
src/tgbaalgos/stats.cc, src/tgbaalgos/stats.hh,
src/tgbaalgos/stripacc.cc, src/tgbaalgos/stripacc.hh,
src/tgbaalgos/stutter.cc, src/tgbaalgos/stutter.hh,
src/tgbaalgos/totgba.cc, src/tgbaalgos/totgba.hh,
src/tgbaalgos/translate.cc, src/tgbaalgos/translate.hh,
src/tgbatest/checkpsl.cc, src/tgbatest/complementation.cc,
src/tgbatest/emptchk.cc, src/tgbatest/ltl2tgba.cc,
src/tgbatest/randtgba.cc, wrap/python/spot_impl.i,
wrap/python/tests/automata-io.ipynb, wrap/python/tests/automata.ipynb,
wrap/python/tests/piperead.ipynb, wrap/python/tests/testingaut.ipynb:
Rename tgba_digraph as twa_graph.

* src/tgba/tgbagraph.cc (purge_dead_states): Using a DFS to compute a
topological order, allowing to remove useless using a second
pass (instead of iterating the passes until there is nothing to remove).
* src/tgbaalgos/remfin.cc: Call purge_dead_states().
* src/tgbatest/remfin.test, src/tgbatest/det.test: Adjust expected
output.
* doc/org/autfilt.org: Update example.

* src/tgba/tgbagraph.cc (merge_transitions): Disable acceptance
merging if Fin acceptance is used.
* src/tgbaalgos/degen.cc, src/tgbaalgos/dtbasat.cc,
src/tgbaalgos/dtgbasat.cc, src/tgbaalgos/isweakscc.cc,
src/tgbaalgos/lbtt.cc, src/tgbaalgos/minimize.cc,
src/tgbaalgos/neverclaim.cc, src/tgbaalgos/safety.cc,
src/tgbaalgos/sccfilter.cc, src/tgbaalgos/simulation.cc: Throw an
exception if an unsupported type of acceptance is received.

* src/tgba/tgbagraph.cc (merge_transition): Do it.
* src/tgbatest/readsave.test: Test it.
* src/bin/autfilt.cc: Fix statistics about the original
automaton when using --stats or --name.

This fixes #6.

* src/graph/graph.hh: Rename the old transitions() as
transition_vector(), and implement a new transitions() that iterates
only on non-dead transitions.
* src/tgba/tgbagraph.hh, src/tgba/tgbagraph.cc, src/graph/ngraph.hh:
Adjust wrappers.
* src/hoaparse/hoaparse.yy, src/tgbaalgos/complete.cc,
src/tgbaalgos/dtbasat.cc, src/tgbaalgos/dtgbasat.cc,
src/tgbaalgos/randomize.cc, src/tgbaalgos/safety.cc: Adjust calls.

... and use it to sort transitions.

* src/graph/graph.hh: Adjust storage of source index.  Provide
remove_dead_transitions_(), sort_transitions_() and
chain_transitions_() methods.
* src/tgba/tgbagraph.cc (merge_transitions): Rewrite using
above methods.
* src/tgba/tgbagraph.hh: Add a comparison operator for
transitions.
* src/tgbatest/degenlskip.test, src/tgbatest/det.test,
src/tgbatest/ltl2ta.test, src/tgbatest/neverclaimread.test,
src/tgbatest/readsave.test: Adjust expected transition order in test
cases.

* src/tgba/tgbagraph.cc (purge_unreachable_states): Rewrite using
only one vector.

* src/tgba/tgbagraph.hh, src/tgba/tgbagraph.cc: Add a copy constructor,
and some method to purge unreachable states.
* src/graph/graph.hh (defrag_states): Erase transition of removed
states.
* src/tgbaalgos/complete.cc, src/tgbaalgos/compsusp.cc,
src/tgbaalgos/dtgbacomp.cc, src/tgbaalgos/simulation.cc,
src/tgbatest/checkpsl.cc, src/tgbatest/emptchk.cc,
src/tgbatest/ltl2tgba.cc: Adjust to use make_tgba_digraph() instead
of tgba_dupexp_dfs() or tgba_dupexp_bfs().
* src/tgbaalgos/dupexp.cc, src/tgbaalgos/dupexp.hh: Use
make_tgba_digraph() when possible.
* src/tgbatest/det.test, src/tgbatest/sim.test: Adjust expected results.

* src/tgba/tgbagraph.hh, src/tgba/tgbagraph.cc (purge_dead_states): New.
* src/graph/graph.hh (defrag_states): New methods.
* src/tgbaalgos/dtgbacomp.cc: Use it.
* src/tgbatest/det.test: Fix state number.

This is a huge patch, that took over a month to complete.  The bit sets
are currently restricted to what 'unsigned can store', but it should be
easy to extend it to 'uint64_t' should we need it.

* NEWS: Update.
* src/tgba/acc.hh: New file.
* src/tgbatest/acc.cc, src/tgbatest/acc.test: Test it.
* src/tgba/tgbakvcomplement.cc, src/tgba/tgbakvcomplement.hh,
src/tgba/tgbasgba.cc, src/tgba/tgbasgba.hh: Delete.  The KV
complementation is too slow to be used in practice, and I somehow broke
it during the conversion to bitsets.  The tgba->sgba conversion was only
used for the KV complementation, and should be better redone on
tgba_digraph_ptr should it be needed again.
* src/bin/ltlcross.cc, src/dstarparse/dra2ba.cc,
src/dstarparse/nsa2tgba.cc, src/graphtest/tgbagraph.cc,
src/graphtest/tgbagraph.test, src/kripke/fairkripke.cc,
src/kripke/fairkripke.hh, src/kripke/kripke.cc, src/kripke/kripke.hh,
src/kripke/kripkeexplicit.cc, src/kripke/kripkeexplicit.hh,
src/misc/hash.hh, src/neverparse/neverclaimparse.yy, src/priv/accmap.hh,
src/ta/ta.cc, src/ta/ta.hh, src/ta/taexplicit.cc, src/ta/taexplicit.hh,
src/ta/taproduct.cc, src/ta/taproduct.hh, src/ta/tgta.cc,
src/ta/tgta.hh, src/ta/tgtaexplicit.cc, src/ta/tgtaexplicit.hh,
src/ta/tgtaproduct.cc, src/ta/tgtaproduct.hh, src/taalgos/dotty.cc,
src/taalgos/emptinessta.cc, src/taalgos/minimize.cc,
src/taalgos/tgba2ta.cc, src/tgba/Makefile.am, src/tgba/fwd.hh,
src/tgba/taatgba.cc, src/tgba/taatgba.hh, src/tgba/tgba.cc,
src/tgba/tgba.hh, src/tgba/tgbagraph.cc, src/tgba/tgbagraph.hh,
src/tgba/tgbamask.cc, src/tgba/tgbamask.hh, src/tgba/tgbaproduct.cc,
src/tgba/tgbaproduct.hh, src/tgba/tgbaproxy.cc, src/tgba/tgbaproxy.hh,
src/tgba/tgbasafracomplement.cc, src/tgba/tgbasafracomplement.hh,
src/tgbaalgos/bfssteps.cc, src/tgbaalgos/complete.cc,
src/tgbaalgos/compsusp.cc, src/tgbaalgos/degen.cc,
src/tgbaalgos/dotty.cc, src/tgbaalgos/dtbasat.cc,
src/tgbaalgos/dtgbacomp.cc, src/tgbaalgos/dtgbasat.cc,
src/tgbaalgos/dupexp.cc, src/tgbaalgos/emptiness.cc,
src/tgbaalgos/emptiness.hh, src/tgbaalgos/gtec/ce.cc,
src/tgbaalgos/gtec/gtec.cc, src/tgbaalgos/gtec/gtec.hh,
src/tgbaalgos/gtec/sccstack.cc, src/tgbaalgos/gtec/sccstack.hh,
src/tgbaalgos/gv04.cc, src/tgbaalgos/hoaf.cc,
src/tgbaalgos/isweakscc.cc, src/tgbaalgos/lbtt.cc,
src/tgbaalgos/ltl2tgba_fm.cc, src/tgbaalgos/magic.cc,
src/tgbaalgos/ndfs_result.hxx, src/tgbaalgos/neverclaim.cc,
src/tgbaalgos/postproc.cc, src/tgbaalgos/powerset.cc,
src/tgbaalgos/randomgraph.cc, src/tgbaalgos/randomgraph.hh,
src/tgbaalgos/reducerun.cc, src/tgbaalgos/replayrun.cc,
src/tgbaalgos/safety.cc, src/tgbaalgos/save.cc, src/tgbaalgos/scc.cc,
src/tgbaalgos/scc.hh, src/tgbaalgos/sccfilter.cc,
src/tgbaalgos/sccinfo.cc, src/tgbaalgos/sccinfo.hh,
src/tgbaalgos/se05.cc, src/tgbaalgos/simulation.cc,
src/tgbaalgos/simulation.hh, src/tgbaalgos/stats.cc,
src/tgbaalgos/stripacc.cc, src/tgbaalgos/tau03.cc,
src/tgbaalgos/tau03opt.cc, src/tgbaalgos/weight.cc,
src/tgbaalgos/weight.hh, src/tgbaparse/tgbaparse.yy,
src/tgbatest/Makefile.am, src/tgbatest/complementation.cc,
src/tgbatest/complementation.test, src/tgbatest/degenlskip.test,
src/tgbatest/det.test, src/tgbatest/dstar.test, src/tgbatest/emptchk.cc,
src/tgbatest/explpro2.test, src/tgbatest/explpro3.test,
src/tgbatest/explpro4.test, src/tgbatest/explprod.test,
src/tgbatest/ltl2tgba.cc, src/tgbatest/ltl2tgba.test,
src/tgbatest/maskacc.cc, src/tgbatest/maskacc.test,
src/tgbatest/neverclaimread.test, src/tgbatest/randtgba.cc,
src/tgbatest/readsave.test, src/tgbatest/sim.test,
src/tgbatest/sim2.test, src/tgbatest/spotlbtt.test,
src/tgbatest/tgbaread.test, src/tgbatest/tripprod.test,
iface/dve2/dve2.cc: Adjust or use to the new acceptance interface.

* src/tgba/tgbagraph.hh: Remove the set_bprop/get_bprop interface.
* src/tgba/tgba.cc, src/tgba/tgba.hh: Add a new interface for
setting/querying/copying the following properties: single_acc_set,
state_based_acc, inherently_weak, deterministic.
* src/dstarparse/dra2ba.cc, src/dstarparse/nra2nba.cc,
src/neverparse/neverclaimparse.yy, src/saba/sabacomplementtgba.cc,
src/tgba/tgbagraph.cc, src/tgbaalgos/degen.cc, src/tgbaalgos/dotty.cc,
src/tgbaalgos/isdet.cc, src/tgbaalgos/lbtt.cc,
src/tgbaalgos/minimize.cc, src/tgbaalgos/neverclaim.cc,
src/tgbaalgos/postproc.cc, src/tgbaalgos/sccfilter.cc,
src/tgbaalgos/simulation.cc, src/tgbatest/degenlskip.test,
src/tgbatest/ltl2tgba.cc: Adjust to the new interface, or use
it to bypass some useless work.

* src/tgba/tgbagraph.cc: New file.
* src/tgba/Makefile.am: Adjust.
* src/tgba/tgbagraph.hh (set_single_acceptance_set,
new_acc_transition): New methods.
(set_acceptance_conditions, merge_transitions): Move body
to tgbagraph.cc.
* src/tgbaalgos/complete.cc, src/tgbaalgos/degen.cc,
src/tgbaalgos/dtbasat.cc, src/tgbaalgos/dtgbacomp.cc,
src/neverparse/neverclaimparse.yy, src/dstarparse/dra2ba.cc,
src/dstarparse/nra2nba.cc: Simplify using these new methods.