* bin/common_aoutput.cc: Here.
* NEWS, doc/org/oaut.org: Mention it.
* tests/core/readsave.test: Use it once.

This is so that we can have -d as an alias for --dot everywhere.

* bin/randaut.cc: Rename -d as -e.
* NEWS: Mention the change.
* doc/org/autfilt.org, doc/org/oaut.org, doc/org/randaut.org,
tests/core/parseaut.test, tests/core/readsave.test: Adjust.

* spot/bin/: Move...
* bin/: ... here.
* spot/tests/: Move...
* tests/: ... here.
* Makefile.am, README, bench/stutter/Makefile.am,
bench/stutter/stutter_invariance_formulas.cc, doc/Makefile.am,
configure.ac, debian/rules, spot/Makefile.am, spot/ltsmin/Makefile.am,
spot/ltsmin/kripke.test, spot/sanity/style.test, python/tests/run.in:
Adjust.